5CJ6 image
Deposition Date 2015-07-14
Release Date 2016-01-06
Last Version Date 2024-03-06
Entry Detail
PDB ID:
5CJ6
Keywords:
SIGNALING PROTEIN
Title:
Crystal Structure of a Selective Androgen Receptor Modulator Bound to the Ligand Binding Domain of the Human Androgen Receptor
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
synthetic construct (Taxon ID: 32630)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.07 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 21
5CJ6 validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Androgen receptor
Gene (Uniprot):AR
Chain IDs:A
Chain Length:283
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P10275 Pfam ID:PF00104
Protein Blast
Polymer Type:polypeptide(L)
Molecule:small peptide
Chain IDs:B
Chain Length:10
Number of Molecules:1
Biological Source:synthetic construct
UniProt ID:P10275 Pfam ID:PF00104
Ligand Molecules
51Y
Primary Citation
2-Chloro-4-[[(1R,2R)-2-hydroxy-2-methyl-cyclopentyl]amino]-3-methyl-benzonitrile: A Transdermal Selective Androgen Receptor Modulator (SARM) for Muscle Atrophy.
J.Med.Chem. 59 750 755 (2016)
PMID: 26683992 DOI: 10.1021/acs.jmedchem.5b01168

Abstact

A transdermal SARM has a potential to have therapeutic benefit through anabolic activity in muscle while sparing undesired effects of benign prostate hyperplasia (BPH) and liver-mediated decrease in HDL-C. 2-Chloro-4-[(2-hydroxy-2-methyl-cyclopentyl)amino]-3-methyl-benzonitrile 6 showed the desired muscle and prostate effects in a preclinical ORX rat model. Compound 6 had minimal effect on HDL-C levels in cynomolgus monkeys and showed human cadaver skin permeability, thus making it an effective tool for proof-of-concept studies in a clinical setting.

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Disease

Primary Citation of related structures
5CJ6