5CGO image
Deposition Date 2015-07-09
Release Date 2015-09-23
Last Version Date 2023-11-15
Entry Detail
PDB ID:
5CGO
Title:
Structure of quasiracemic Ala-Magainin 2 with a beta amino acid substitution at position 13
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.50 Å
R-Value Free:
0.23
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ACPC-13 derivative of Ala-Magainin 2
Chain IDs:A, B
Chain Length:23
Number of Molecules:2
Biological Source:synthetic construct
Protein Blast
Polymer Type:polypeptide(D)
Molecule:D-Ala-Magainin 2
Chain IDs:C, D
Chain Length:23
Number of Molecules:2
Biological Source:synthetic construct
Primary Citation
Quasiracemate Crystal Structures of Magainin 2 Derivatives Support the Functional Significance of the Phenylalanine Zipper Motif.
J.Am.Chem.Soc. 137 11884 11887 (2015)
PMID: 26369301 DOI: 10.1021/jacs.5b07206

Abstact

Quasiracemic crystallography has been used to explore the significance of homochiral and heterochiral associations in a set of host-defense peptide derivatives. The previously reported racemic crystal structure of a magainin 2 derivative displayed a homochiral antiparallel dimer association featuring a "phenylalanine zipper" notable for the dual roles of phenylalanines in mediating dimerization and formation of an exposed hydrophobic swath. This motif is seen as well in two new quasiracemate crystals that contain the d form of the magainin 2 derivative along with an l-peptide in which one Ala has been replaced by a β-amino acid residue. This structural trend supports the hypothesis that the Phe zipper motif has functional significance.

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Primary Citation of related structures
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