5CEN image
Deposition Date 2015-07-07
Release Date 2015-10-14
Last Version Date 2023-09-27
Entry Detail
PDB ID:
5CEN
Keywords:
Title:
Crystal structure of DLK (kinase domain)
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Mitogen-activated protein kinase kinase kinase 12
Gene (Uniprot):MAP3K12
Chain IDs:A
Chain Length:300
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Scaffold-Hopping and Structure-Based Discovery of Potent, Selective, And Brain Penetrant N-(1H-Pyrazol-3-yl)pyridin-2-amine Inhibitors of Dual Leucine Zipper Kinase (DLK, MAP3K12).
J.Med.Chem. 58 8182 8199 (2015)
PMID: 26431428 DOI: 10.1021/acs.jmedchem.5b01072

Abstact

Recent data suggest that inhibition of dual leucine zipper kinase (DLK, MAP3K12) has therapeutic potential for treatment of a number of indications ranging from acute neuronal injury to chronic neurodegenerative disease. Thus, high demand exists for selective small molecule DLK inhibitors with favorable drug-like properties and good CNS penetration. Herein we describe a shape-based scaffold hopping approach to convert pyrimidine 1 to a pyrazole core with improved physicochemical properties. We also present the first crystal structures of DLK. By utilizing a combination of property and structure-based design, we identified inhibitor 11, a potent, selective, and brain-penetrant inhibitor of DLK with activity in an in vivo nerve injury model.

Legend

Protein

Chemical

Disease

Primary Citation of related structures