5CBG image
Deposition Date 2015-06-30
Release Date 2016-07-20
Last Version Date 2023-09-27
Entry Detail
PDB ID:
5CBG
Title:
Calcium activated non-selective cation channel
Biological Source:
Method Details:
Experimental Method:
Resolution:
3.14 Å
R-Value Free:
0.29
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
I 4
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ion transport 2 domain protein
Gene (Uniprot):Tpau_1687
Chain IDs:A, B, C, D, E, F
Chain Length:129
Number of Molecules:6
Biological Source:Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040)
Primary Citation
Structural and functional characterization of a calcium-activated cation channel from Tsukamurella paurometabola.
Nat Commun 7 12753 12753 (2016)
PMID: 27678077 DOI: 10.1038/ncomms12753

Abstact

The selectivity filter is an essential functional element of K+ channels that is highly conserved both in terms of its primary sequence and its three-dimensional structure. Here, we investigate the properties of an ion channel from the Gram-positive bacterium Tsukamurella paurometabola with a selectivity filter formed by an uncommon proline-rich sequence. Electrophysiological recordings show that it is a non-selective cation channel and that its activity depends on Ca2+ concentration. In the crystal structure, the selectivity filter adopts a novel conformation with Ca2+ ions bound within the filter near the pore helix where they are coordinated by backbone oxygen atoms, a recurrent motif found in multiple proteins. The binding of Ca2+ ion in the selectivity filter controls the widening of the pore as shown in crystal structures and in molecular dynamics simulations. The structural, functional and computational data provide a characterization of this calcium-gated cationic channel.

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Primary Citation of related structures
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