5C1M image
Deposition Date 2015-06-15
Release Date 2015-08-05
Last Version Date 2023-09-27
Entry Detail
PDB ID:
5C1M
Title:
Crystal structure of active mu-opioid receptor bound to the agonist BU72
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Lama glama (Taxon ID: 9844)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.07 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
I 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Mu-type opioid receptor
Gene (Uniprot):Oprm1
Chain IDs:A
Chain Length:296
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:Nanobody 39
Chain IDs:B
Chain Length:125
Number of Molecules:1
Biological Source:Lama glama
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
YCM A CYS modified residue
Primary Citation

Abstact

Activation of the μ-opioid receptor (μOR) is responsible for the efficacy of the most effective analgesics. To shed light on the structural basis for μOR activation, here we report a 2.1 Å X-ray crystal structure of the murine μOR bound to the morphinan agonist BU72 and a G protein mimetic camelid antibody fragment. The BU72-stabilized changes in the μOR binding pocket are subtle and differ from those observed for agonist-bound structures of the β2-adrenergic receptor (β2AR) and the M2 muscarinic receptor. Comparison with active β2AR reveals a common rearrangement in the packing of three conserved amino acids in the core of the μOR, and molecular dynamics simulations illustrate how the ligand-binding pocket is conformationally linked to this conserved triad. Additionally, an extensive polar network between the ligand-binding pocket and the cytoplasmic domains appears to play a similar role in signal propagation for all three G-protein-coupled receptors.

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Primary Citation of related structures
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