5C1J image
Entry Detail
PDB ID:
5C1J
Keywords:
Title:
Crystal Structure of native (reduced) CorB
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2015-06-14
Release Date:
2016-06-29
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:CorB
Chain IDs:A
Chain Length:335
Number of Molecules:1
Biological Source:Corallococcus coralloides
Ligand Molecules
Primary Citation
Structural basis of head to head polyketide fusion by CorB.
Chem Sci 6 6525 6536 (2015)
PMID: 28757960 DOI: 10.1039/c5sc02488a

Abstact

Corallopyronin A is a polyketide derived from the myxobacterium Corallococcus coralloides with potent antibiotic features. The gene cluster responsible for the biosynthesis of corallopyronin A has been described recently, and it was proposed that CorB acts as a ketosynthase to interconnect two polyketide chains in a rare head-to-head condensation reaction. We determined the structure of CorB, the interconnecting polyketide synthase, to high resolution and found that CorB displays a thiolase fold. Site-directed mutagenesis showed that the catalytic triad consisting of a cysteine, a histidine and an asparagine is crucial for catalysis, and that this triad shares similarities with the triad found in HMG-CoA synthases. We synthesized a substrate mimic to derivatize purified CorB and confirmed substrate attachment by ESI-MS. Structural analysis of the complex yielded an electron density-based model for the polyketide chain and showed that the unusually wide, T-shaped active site is able to accommodate two polyketides simultaneously. Our structural analysis provides a platform for understanding the unusual head-to-head polyketide-interconnecting reaction catalyzed by CorB.

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