5C05 image
Deposition Date 2015-06-12
Release Date 2016-01-13
Last Version Date 2024-01-10
Entry Detail
PDB ID:
5C05
Title:
Crystal Structure of Gamma-terpinene Synthase from Thymus vulgaris
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.65 Å
R-Value Free:
0.18
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Putative gamma-terpinene synthase
Mutations:G356D, A565T
Chain IDs:A, B
Chain Length:559
Number of Molecules:2
Biological Source:Thymus vulgaris
Ligand Molecules
Primary Citation
Expression, crystallization and structure elucidation of gamma-terpinene synthase from Thymus vulgaris.
Acta Crystallogr.,Sect.F 72 16 23 (2016)
PMID: 26750479 DOI: 10.1107/S2053230X15023043

Abstact

The biosynthesis of γ-terpinene, a precursor of the phenolic isomers thymol and carvacrol found in the essential oil from Thymus sp., is attributed to the activitiy of γ-terpinene synthase (TPS). Purified γ-terpinene synthase from T. vulgaris (TvTPS), the Thymus species that is the most widely spread and of the greatest economical importance, is able to catalyze the enzymatic conversion of geranyl diphosphate (GPP) to γ-terpinene. The crystal structure of recombinantly expressed and purified TvTPS is reported at 1.65 Å resolution, confirming the dimeric structure of the enzyme. The putative active site of TvTPS is deduced from its pronounced structural similarity to enzymes from other species of the Lamiaceae family involved in terpenoid biosynthesis: to (+)-bornyl diphosphate synthase and 1,8-cineole synthase from Salvia sp. and to (4S)-limonene synthase from Mentha spicata.

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Primary Citation of related structures