5BSY image
Deposition Date 2015-06-02
Release Date 2015-09-09
Last Version Date 2024-01-10
Entry Detail
PDB ID:
5BSY
Keywords:
Title:
Crystal structure of GII.10 P domain in complex with lemon juice
Biological Source:
Source Organism:
Norwalk virus (Taxon ID: 11983)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.60 Å
R-Value Free:
0.18
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Capsid protein
Chain IDs:A, B
Chain Length:315
Number of Molecules:2
Biological Source:Norwalk virus
Primary Citation
Treatment of norovirus particles with citrate.
Virology 485 199 204 (2015)
PMID: 26295280 DOI: 10.1016/j.virol.2015.07.009

Abstact

Human norovirus is a dominant cause of acute gastroenteritis around the world. Several norovirus disinfectants label citric acid as an active ingredient. In this study, we showed that norovirus virus-like particles (VLPs) treated with citrate buffer caused the particles to alter their morphology, including increased diameters associated with a new ring-like structure. We also found that epitopes on the protruding (P) domain on these particles were more readily accessible to antibodies after the citrate treatment. These results suggested that citrate had a direct effect on the norovirus particles. Using X-ray crystallography, we showed that the P domain bound citrate from lemon juice and a disinfectant containing citric acid. Importantly, citrate binds at the histo-blood group antigen binding pocket, which are attachment factors for norovirus infections. Taken together, these new findings suggested that it might be possible to treat/reduce norovirus infections with citrate, although further studies are needed.

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