5BQG image
Entry Detail
PDB ID:
5BQG
Title:
Crystal Structure of mPGES-1 Bound to an Inhibitor
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2015-05-29
Release Date:
2016-04-13
Method Details:
Experimental Method:
Resolution:
1.44 Å
R-Value Free:
0.16
R-Value Work:
0.14
R-Value Observed:
0.15
Space Group:
H 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Prostaglandin E synthase
Chain IDs:A
Chain Length:154
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation

Abstact

As part of a program aimed at the discovery of antinociceptive therapy for inflammatory conditions, a screening hit was found to inhibit microsomal prostaglandin E synthase-1 (mPGES-1) with an IC50 of 17.4 μM. Structural information was used to improve enzyme potency by over 1000-fold. Addition of an appropriate substituent alleviated time-dependent cytochrome P450 3A4 (CYP3A4) inhibition. Further structure-activity relationship (SAR) studies led to 8, which had desirable potency (IC50 = 12 nM in an ex vivo human whole blood (HWB) assay) and absorption, distribution, metabolism, and excretion (ADME) properties. Studies on the formulation of 8 identified 8·H3PO4 as suitable for clinical development. Omission of a lipophilic portion of the compound led to 26, a readily orally bioavailable inhibitor with potency in HWB comparable to celecoxib. Furthermore, 26 was selective for mPGES-1 inhibition versus other mechanisms in the prostanoid pathway. These factors led to the selection of 26 as a second clinical candidate.

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Primary Citation of related structures