5BOI image
Deposition Date 2015-05-27
Release Date 2015-08-12
Last Version Date 2024-05-08
Entry Detail
PDB ID:
5BOI
Title:
Bacillus megaterium YpeB C-terminal domain
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
C 2 2 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Germination protein YpeB
Gene (Uniprot):ypeB
Chain IDs:A
Chain Length:246
Number of Molecules:1
Biological Source:Bacillus megaterium QM B1551
Ligand Molecules
Primary Citation
Crystal structure of the PepSY-containing domain of the YpeB protein involved in germination of bacillus spores.
Proteins 83 1914 1921 (2015)
PMID: 26219275 DOI: 10.1002/prot.24868

Abstact

The crystal structure of the C-terminal domain of the Bacillus megaterium YpeB protein has been solved by X-ray crystallography to 1.80-Å resolution. The full-length protein is essential in stabilising the SleB cortex lytic enzyme in Bacillus spores, and may have a role in regulating SleB activity during spore germination. The YpeB-C crystal structure comprises three tandemly repeated PepSY domains, which are aligned to form an extended laterally compressed molecule. A predominantly positively charged region located in the second PepSY domain may provide a site for protein interactions that are important in stabilising SleB and YpeB within the spore.

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Chemical

Disease

Primary Citation of related structures