5BNP image
Entry Detail
PDB ID:
5BNP
Keywords:
Title:
Crystal structure of human enterovirus D68 in complex with 3'SLN
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2015-05-26
Release Date:
2015-11-18
Method Details:
Experimental Method:
Resolution:
2.15 Å
R-Value Free:
0.24
R-Value Work:
0.24
Space Group:
I 2 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Capsid protein VP1
Chain IDs:A
Chain Length:297
Number of Molecules:1
Biological Source:Enterovirus D68
Polymer Type:polypeptide(L)
Description:Capsid protein VP2
Chain IDs:B
Chain Length:248
Number of Molecules:1
Biological Source:Enterovirus D68
Polymer Type:polypeptide(L)
Description:Capsid protein VP3
Chain IDs:C
Chain Length:247
Number of Molecules:1
Biological Source:Enterovirus D68
Polymer Type:polypeptide(L)
Description:Capsid protein VP4
Chain IDs:D
Chain Length:68
Number of Molecules:1
Biological Source:Enterovirus D68
Peptide-like Molecules
PRD_900067
Primary Citation
Sialic acid-dependent cell entry of human enterovirus D68.
Nat Commun 6 8865 8865 (2015)
PMID: 26563423 DOI: 10.1038/ncomms9865

Abstact

Human enterovirus D68 (EV-D68) is a causative agent of childhood respiratory diseases and has now emerged as a global public health threat. Nevertheless, knowledge of the tissue tropism and pathogenesis of EV-D68 has been hindered by a lack of studies on the receptor-mediated EV-D68 entry into host cells. Here we demonstrate that cell surface sialic acid is essential for EV-D68 to bind to and infect susceptible cells. Crystal structures of EV-D68 in complex with sialylated glycan receptor analogues show that they bind into the 'canyon' on the virus surface. The sialic acid receptor induces a cascade of conformational changes in the virus to eject a fatty-acid-like molecule that regulates the stability of the virus. Thus, virus binding to a sialic acid receptor and to immunoglobulin-like receptors used by most other enteroviruses share a conserved mechanism for priming viral uncoating and facilitating cell entry.

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Primary Citation of related structures