5B61 image
Deposition Date 2016-05-24
Release Date 2017-06-14
Last Version Date 2024-03-20
Entry Detail
PDB ID:
5B61
Title:
Extra-superfolder GFP
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.12 Å
R-Value Free:
0.25
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Green fluorescent protein
Chain IDs:A, B, C, D, E, F
Chain Length:238
Number of Molecules:6
Biological Source:Aequorea victoria
Ligand Molecules
Primary Citation
The mechanism of folding robustness revealed by the crystal structure of extra-superfolder GFP.
FEBS Lett. 591 442 447 (2017)
PMID: 27990640 DOI: 10.1002/1873-3468.12534

Abstact

Stability of green fluorescent protein (GFP) is sometimes important for a proper practical application of this protein. Random mutagenesis and targeted mutagenesis have been used to create better-folded variants of GFP, including recently reported extra-superfolder GFP. Our aim was to determine the crystal structure of extra-superfolder GFP, which is more robustly folded and stable than GFP and superfolder GFP. The structural and structure-based mutagenesis analyses revealed that some of the mutations that created extra-superfolder GFP (F46L, E126K, N149K, and S208L) contribute to folding robustness by stabilizing extra-superfolder GFP with various noncovalent bonds.

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Protein

Chemical

Disease

Primary Citation of related structures
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