5B3R image
Deposition Date 2016-03-10
Release Date 2017-02-15
Last Version Date 2024-03-20
Entry Detail
PDB ID:
5B3R
Keywords:
Title:
Crystal structure of metallo-beta-lactamase IMP-18 from Pseudomonas aeruginosa
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 2 2 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:IMP-18
Gene (Uniprot):IMP-18
Chain IDs:A, B
Chain Length:228
Number of Molecules:2
Biological Source:Pseudomonas aeruginosa
Primary Citation
Structural and Mutagenic Analysis of Metallo-beta-Lactamase IMP-18
Antimicrob. Agents Chemother. 60 5521 5526 (2016)
PMID: 27381398 DOI: 10.1128/AAC.00985-16

Abstact

IMP-type metallo-β-lactamases (MBLs) are exogenous zinc metalloenzymes that hydrolyze a broad range of β-lactams, including carbapenems. Here we report the crystal structure of IMP-18, an MBL cloned from Pseudomonas aeruginosa, at 2.0-Å resolution. The overall structure of IMP-18 resembles that of IMP-1, with an αβ/βα "folded sandwich" configuration, but the loop that covers the active site has a distinct conformation. The relationship between IMP-18's loop conformation and its kinetic properties was investigated by replacing the amino acid residues that can affect the loop conformation (Lys44, Thr50, and Ile69) in IMP-18 with those occupying the corresponding positions in the well-described enzyme IMP-1. The replacement of Thr50 with Pro considerably modified IMP-18's kinetic properties, specifically those pertaining to meropenem, with the kcat/Km value increased by an order of magnitude. The results indicate that this is a key residue that defines the kinetic properties of IMP-type β-lactamases.

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Primary Citation of related structures
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