5B1Q image
Deposition Date 2015-12-11
Release Date 2016-04-20
Last Version Date 2024-03-20
Entry Detail
PDB ID:
5B1Q
Keywords:
Title:
Human herpesvirus 6B tegument protein U14
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.85 Å
R-Value Free:
0.23
R-Value Work:
0.17
R-Value Observed:
0.18
Space Group:
P 21 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:U14 protein
Gene (Uniprot):U14
Chain IDs:A, B
Chain Length:459
Number of Molecules:2
Biological Source:Human herpesvirus 6B (strain HST)
Ligand Molecules
Primary Citation
Crystal Structure of Human Herpesvirus 6B Tegument Protein U14.
Plos Pathog. 12 e1005594 e1005594 (2016)
PMID: 27152739 DOI: 10.1371/journal.ppat.1005594

Abstact

The tegument protein U14 of human herpesvirus 6B (HHV-6B) constitutes the viral virion structure and is essential for viral growth. To define the characteristics and functions of U14, we determined the crystal structure of the N-terminal domain of HHV-6B U14 (U14-NTD) at 1.85 Å resolution. U14-NTD forms an elongated helix-rich fold with a protruding β hairpin. U14-NTD exists as a dimer exhibiting broad electrostatic interactions and a network of hydrogen bonds. This is first report of the crystal structure and dimerization of HHV-6B U14. The surface of the U14-NTD dimer reveals multiple clusters of negatively- and positively-charged residues that coincide with potential functional sites of U14. Three successive residues, L424, E425 and V426, which relate to viral growth, reside on the β hairpin close to the dimer's two-fold axis. The hydrophobic side-chains of L424 and V426 that constitute a part of a hydrophobic patch are solvent-exposed, indicating the possibility that the β hairpin region is a key functional site of HHV-6 U14. Structure-based sequence comparison suggests that U14-NTD corresponds to the core fold conserved among U14 homologs, human herpesvirus 7 U14, and human cytomegalovirus UL25 and UL35, although dimerization appears to be a specific feature of the U14 group.

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Primary Citation of related structures