5AWG image
Deposition Date 2015-07-03
Release Date 2015-11-11
Last Version Date 2024-05-29
Entry Detail
PDB ID:
5AWG
Title:
Crystal structure of Hg-bound SufB-SufC-SufD complex from Escherichia coli
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
4.28 Å
R-Value Free:
0.34
R-Value Work:
0.29
R-Value Observed:
0.29
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:FeS cluster assembly protein SufB
Gene (Uniprot):sufB
Chain IDs:A, E
Chain Length:495
Number of Molecules:2
Biological Source:Escherichia coli (strain K12)
Polymer Type:polypeptide(L)
Molecule:FeS cluster assembly protein SufD
Gene (Uniprot):sufD
Chain IDs:B, F
Chain Length:423
Number of Molecules:2
Biological Source:Escherichia coli (strain K12)
Polymer Type:polypeptide(L)
Molecule:Probable ATP-dependent transporter SufC
Gene (Uniprot):sufC
Chain IDs:C, D, G, H
Chain Length:248
Number of Molecules:4
Biological Source:Escherichia coli (strain K12)
Ligand Molecules
Primary Citation
Functional Dynamics Revealed by the Structure of the SufBCD Complex, a Novel ATP-binding Cassette (ABC) Protein That Serves as a Scaffold for Iron-Sulfur Cluster Biogenesis
J.Biol.Chem. 290 29717 29731 (2015)
PMID: 26472926 DOI: 10.1074/jbc.M115.680934

Abstact

ATP-binding cassette (ABC)-type ATPases are chemomechanical engines involved in diverse biological pathways. Recent genomic information reveals that ABC ATPase domains/subunits act not only in ABC transporters and structural maintenance of chromosome proteins, but also in iron-sulfur (Fe-S) cluster biogenesis. A novel type of ABC protein, the SufBCD complex, functions in the biosynthesis of nascent Fe-S clusters in almost all Eubacteria and Archaea, as well as eukaryotic chloroplasts. In this study, we determined the first crystal structure of the Escherichia coli SufBCD complex, which exhibits the common architecture of ABC proteins: two ABC ATPase components (SufC) with function-specific components (SufB-SufD protomers). Biochemical and physiological analyses based on this structure provided critical insights into Fe-S cluster assembly and revealed a dynamic conformational change driven by ABC ATPase activity. We propose a molecular mechanism for the biogenesis of the Fe-S cluster in the SufBCD complex.

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Primary Citation of related structures