5AVL image
Entry Detail
PDB ID:
5AVL
Keywords:
Title:
Crystal structure of LXRalpha in complex with tert-butyl benzoate analog, compound 32b
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2015-06-17
Release Date:
2015-08-26
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
I 4 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Oxysterols receptor LXR-alpha
Chain IDs:A
Chain Length:283
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Nuclear receptor coactivator 1
Chain IDs:B
Chain Length:25
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Discovery and structure-guided optimization of tert-butyl 6-(phenoxymethyl)-3-(trifluoromethyl)benzoates as liver X receptor agonists
Bioorg.Med.Chem.Lett. 25 3914 3920 (2015)
PMID: 26238323 DOI: 10.1016/J.BMCL.2015.07.047

Abstact

To obtain potent liver X receptor (LXR) agonists, a structure-activity relationship study was performed on a series of tert-butyl benzoate analogs. As the crystal structure analysis suggested applicable interactions between the LXR ligand-binding domain and the ligands, two key functional groups were introduced. The introduction of the hydroxyl group on the C6-position of the benzoate part enhanced the agonistic activity in a cell-based assay, and the carboxyl group in terminal improved the pharmacokinetic profile in mice, respectively. The obtained compound 32b increased blood ABCA1 mRNA expression without plasma TG elevation in both mice and cynomolgus monkeys.

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