ISDA: 5AUR

Deposition Date 2015-06-08

Release Date 2015-10-21

Last Version Date 2024-11-13

Entry Detail

PDB ID:

5AUR

Keywords:

ELECTRON TRANSPORT

Title:

Hydrogenobacter thermophilus cytochrome c552 dimer formed by domain swapping at N-terminal region

Biological Source:

Source Organism:

Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) (Taxon ID: 608538)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.26 Å

R-Value Free:

0.22

R-Value Work:

0.18

R-Value Observed:

0.18

Space Group:

P 1

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Cytochrome c-552
Gene (Uniprot):HTH_0988, Hydth_0984
Chain IDs:A, B (auth: C), C (auth: E), D (auth: G)
Chain Length:83
Number of Molecules:4
Biological Source:Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6)

UniProt ID:P15452 Pfam ID:PF00034

Ligand Molecules

HEC

IOD

Primary Citation

Oligomerization enhancement and two domain swapping mode detection for thermostable cytochrome c552via the elongation of the major hinge loop.

Ren, C, Nagao, S, Yamanaka, M, Komori, H, Shomura, Y, Higuchi, Y, Hirota, S.Show

Mol Biosyst 11 3218 3221 (2015)

PMID: 26451671 DOI: 10.1039/c5mb00545k

Abstact

High-order oligomers of Hydrogenobacter thermophilus cytochrome c552 increased with the insertion of more Gly residues between Ala18 and Lys19 at the major hinge loop of the wild-type protein. N-Terminal domain swapping and C-terminal domain swapping were elucidated by using X-ray crystallography for the mutant with the insertion of three Gly residues at the hinge loop.

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Protein

Chemical

Disease

Primary Citation of related structures