5AO9 image
Deposition Date 2015-09-10
Release Date 2015-12-09
Last Version Date 2024-01-10
Entry Detail
PDB ID:
5AO9
Keywords:
Title:
The structure of a novel thermophilic esterase from the Planctomycetes species, Thermogutta terrifontis, Est2-native
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.58 Å
R-Value Free:
0.17
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:ESTERASE
Chain IDs:A
Chain Length:286
Number of Molecules:1
Biological Source:THERMOGUTTA TERRIFONTIS
Primary Citation
The Structure of a Novel Thermophilic Esterase from the Planctomycetes Species, Thermogutta Terrifontis Reveals an Open Active Site due to a Minimal 'CAP' Domain.
Front.Microbiol. 6 1294 ? (2015)
PMID: 26635762 DOI: 10.3389/FMICB.2015.01294

Abstact

A carboxyl esterase (TtEst2) has been identified in a novel thermophilic bacterium, Thermogutta terrifontis from the phylum Planctomycetes and has been cloned and over-expressed in Escherichia coli. The enzyme has been characterized biochemically and shown to have activity toward small p-nitrophenyl (pNP) carboxylic esters with optimal activity for pNP-acetate. The enzyme shows moderate thermostability retaining 75% activity after incubation for 30 min at 70°C. The crystal structures have been determined for the native TtEst2 and its complexes with the carboxylic acid products propionate, butyrate, and valerate. TtEst2 differs from most enzymes of the α/β-hydrolase family 3 as it lacks the majority of the 'cap' domain and its active site cavity is exposed to the solvent. The bound ligands have allowed the identification of the carboxyl pocket in the enzyme active site. Comparison of TtEst2 with structurally related enzymes has given insight into how differences in their substrate preference can be rationalized based upon the properties of their active site pockets.

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Primary Citation of related structures