5AN8 image
Deposition Date 2015-09-04
Release Date 2015-12-23
Last Version Date 2024-10-16
Entry Detail
PDB ID:
5AN8
Title:
Cryo-electron microscopy structure of rabbit TRPV2 ion channel
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.80 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:TRPV2
Gene (Uniprot):TRPV2
Chain IDs:A, B, C, D
Chain Length:613
Number of Molecules:4
Biological Source:ORYCTOLAGUS CUNICULUS
Ligand Molecules
Primary Citation
Cryo-Electron Microscopy of the Trpv2 Ion Channel
Nat.Struct.Mol.Biol. 23 180 ? (2016)
PMID: 26779611 DOI: 10.1038/NSMB.3159

Abstact

Transient receptor potential vanilloid (TRPV) cation channels are polymodal sensors involved in a variety of physiological processes. TRPV2, a member of the TRPV family, is regulated by temperature, by ligands, such as probenecid and cannabinoids, and by lipids. TRPV2 has been implicated in many biological functions, including somatosensation, osmosensation and innate immunity. Here we present the atomic model of rabbit TRPV2 in its putative desensitized state, as determined by cryo-EM at a nominal resolution of ∼4 Å. In the TRPV2 structure, the transmembrane segment 6 (S6), which is involved in gate opening, adopts a conformation different from the one observed in TRPV1. Structural comparisons of TRPV1 and TRPV2 indicate that a rotation of the ankyrin-repeat domain is coupled to pore opening via the TRP domain, and this pore opening can be modulated by rearrangements in the secondary structure of S6.

Legend

Protein

Chemical

Disease

Primary Citation of related structures