5AKQ image
Deposition Date 2015-03-05
Release Date 2015-03-18
Last Version Date 2024-01-10
Entry Detail
PDB ID:
5AKQ
Keywords:
Title:
X-ray structure and mutagenesis studies of the N-isopropylammelide isopropylaminohydrolase, AtzC
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.60 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:N-ISOPROPYLAMMELIDE ISOPROPYL AMIDOHYDROLASE
Gene (Uniprot):atzC
Mutations:YES
Chain IDs:A, B
Chain Length:423
Number of Molecules:2
Biological Source:PSEUDOMONAS SP. ADP
Primary Citation
X-Ray Structure and Mutagenesis Studies of the N-Isopropylammelide Isopropylaminohydrolase, Atzc
Plos One 1 37700 ? (2015)
PMID: 26390431 DOI: 10.1371/JOURNAL.PONE.0137700

Abstact

The N-isopropylammelide isopropylaminohydrolase from Pseudomonas sp. strain ADP, AtzC, provides the third hydrolytic step in the mineralization of s-triazine herbicides, such as atrazine. We obtained the X-ray crystal structure of AtzC at 1.84 Å with a weak inhibitor bound in the active site and then used a combination of in silico docking and site-directed mutagenesis to understand the interactions between AtzC and its substrate, isopropylammelide. The substitution of an active site histidine residue (His249) for an alanine abolished the enzyme's catalytic activity. We propose a plausible catalytic mechanism, consistent with the biochemical and crystallographic data obtained that is similar to that found in carbonic anhydrase and other members of subtype III of the amidohydrolase family.

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