5AJ2 image
Entry Detail
PDB ID:
5AJ2
Keywords:
Title:
Cryo electron tomography of the Naip5-Nlrc4 inflammasome
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2015-02-20
Release Date:
2015-11-11
Method Details:
Experimental Method:
Resolution:
40.00 Å
Aggregation State:
HELICAL ARRAY
Reconstruction Method:
TOMOGRAPHY
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:NLR FAMILY CARD DOMAIN-CONTAINING PROTEIN 4
Chain IDs:A
Chain Length:355
Number of Molecules:1
Biological Source:MUS MUSCULUS
Polymer Type:polypeptide(L)
Description:NLR FAMILY CARD DOMAIN-CONTAINING PROTEIN 4
Chain IDs:B
Chain Length:225
Number of Molecules:1
Biological Source:MUS MUSCULUS
Polymer Type:polypeptide(L)
Description:NLR FAMILY CARD DOMAIN-CONTAINING PROTEIN 4
Chain IDs:C
Chain Length:445
Number of Molecules:1
Biological Source:MUS MUSCULUS
Ligand Molecules
Primary Citation
Cryoelectron Tomography of the Naip5/Nlrc4 Inflammasome: Implications for Nlr Activation.
Structure 23 2349 ? (2015)
PMID: 26585513 DOI: 10.1016/J.STR.2015.10.001

Abstact

Inflammasomes are high molecular weight protein complexes that play a crucial role in innate immunity by activating caspase-1. Inflammasome formation is initiated when molecules originating from invading microorganisms activate nucleotide-binding domain and leucine-rich repeat-containing receptors (NLRs) and induce NLR multimerization. Little is known about the conformational changes involved in NLR activation and the structural organization of NLR multimers. Here, we show by cryoelectron tomography that flagellin-induced NAIP5/NLRC4 multimers form right- and left-handed helical polymers with a diameter of 28 nm and a pitch of 6.5 nm. Subtomogram averaging produced an electron density map at 4 nm resolution, which was used for rigid body fitting of NLR subdomains derived from the crystal structure of dormant NLRC4. The resulting structural model of inflammasome-incorporated NLRC4 indicates that a prominent rotation of the LRR domain of NLRC4 is necessary for multimer formation, providing unprecedented insight into the conformational changes that accompany NLR activation.

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Primary Citation of related structures