5AE2 image
Entry Detail
PDB ID:
5AE2
Keywords:
Title:
Ether Lipid-Generating Enzyme AGPS in complex with inhibitor 1e
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2015-08-25
Release Date:
2015-09-09
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.22
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:ALKYLDIHYDROXYACETONEPHOSPHATE SYNTHASE, PEROXISOMAL
Chain IDs:A, B, C, D
Chain Length:658
Number of Molecules:4
Biological Source:CAVIA PORCELLUS
Primary Citation
Discovery of Inhibitors for the Ether Lipid-Generating Enzyme Agps as Anti-Cancer Agents.
Acs Chem.Biol. 10 2589 2597 (2015)
PMID: 26322624 DOI: 10.1021/ACSCHEMBIO.5B00466

Abstact

Dysregulated ether lipid metabolism is an important hallmark of cancer cells. Previous studies have reported that lowering ether lipid levels by genetic ablation of the ether lipid-generating enzyme alkyl-glycerone phosphate synthase (AGPS) lowers key structural and oncogenic ether lipid levels and alters fatty acid, glycerophospholipid, and eicosanoid metabolism to impair cancer pathogenicity, indicating that AGPS may be a potential therapeutic target for cancer. In this study, we have performed a small-molecule screen to identify candidate AGPS inhibitors. We have identified several lead AGPS inhibitors and have structurally characterized their interactions with the enzyme and show that these inhibitors bind to distinct portions of the active site. We further show that the lead AGPS inhibitor 1a selectively lowers ether lipid levels in several types of human cancer cells and impairs their cellular survival and migration. We provide here the first report of in situ-active pharmacological tools for inhibiting AGPS, which may provide chemical scaffolds for future AGPS inhibitor development for cancer therapy.

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