5A2D image
Deposition Date 2015-05-17
Release Date 2016-02-03
Last Version Date 2024-11-13
Entry Detail
PDB ID:
5A2D
Keywords:
Title:
CRYSTAL STRUCTURE OF BETAINE ALDEHYDE DEHYDROGENASE FROM SPINACH SHOWING A THIOHEMIACETAL WITH BETAINE ALDEHYDE
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.98 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:BETAINE ALDEHYDE DEHYDROGENASE, CHLOROPLASTIC
Gene (Uniprot):BADH
Chain IDs:A, B
Chain Length:497
Number of Molecules:2
Biological Source:SPINACIA OLERACEA
Polymer Type:polypeptide(L)
Molecule:BETAINE ALDEHYDE DEHYDROGENASE, CHLOROPLASTIC
Gene (Uniprot):BADH
Chain IDs:C
Chain Length:497
Number of Molecules:1
Biological Source:SPINACIA OLERACEA
Polymer Type:polypeptide(L)
Molecule:BETAINE ALDEHYDE DEHYDROGENASE, CHLOROPLASTIC
Gene (Uniprot):BADH
Chain IDs:D
Chain Length:497
Number of Molecules:1
Biological Source:SPINACIA OLERACEA
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CSO C CYS S-HYDROXYCYSTEINE
Primary Citation
Reversible, Partial Inactivation of Plant Betaine Aldehyde Dehydrogenase by Betaine Aldehyde: Mechanism and Possible Physiological Implications.
Biochem.J. 473 873 ? (2016)
PMID: 26792760 DOI: 10.1042/BJ20151084

Abstact

In plants, the last step in the biosynthesis of the osmoprotectant glycine betaine (GB) is the NAD(+)-dependent oxidation of betaine aldehyde (BAL) catalysed by some aldehyde dehydrogenase (ALDH) 10 enzymes that exhibit betaine aldehyde dehydrogenase (BADH) activity. Given the irreversibility of the reaction, the short-term regulation of these enzymes is of great physiological relevance to avoid adverse decreases in the NAD(+):NADH ratio. In the present study, we report that the Spinacia oleracea BADH (SoBADH) is reversibly and partially inactivated by BAL in the absence of NAD(+)in a time- and concentration-dependent mode. Crystallographic evidence indicates that the non-essential Cys(450)(SoBADH numbering) forms a thiohemiacetal with BAL, totally blocking the productive binding of the aldehyde. It is of interest that, in contrast to Cys(450), the catalytic cysteine (Cys(291)) did not react with BAL in the absence of NAD(+) The trimethylammonium group of BAL binds in the same position in the inactivating or productive modes. Accordingly, BAL does not inactivate the C(450)SSoBADH mutant and the degree of inactivation of the A(441)I and A(441)C mutants corresponds to their very different abilities to bind the trimethylammonium group. Cys(450)and the neighbouring residues that participate in stabilizing the thiohemiacetal are strictly conserved in plant ALDH10 enzymes with proven or predicted BADH activity, suggesting that inactivation by BAL is their common feature. Under osmotic stress conditions, this novel partial and reversible covalent regulatory mechanism may contribute to preventing NAD(+)exhaustion, while still permitting the synthesis of high amounts of GB and avoiding the accumulation of the toxic BAL.

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