4zmy image
Deposition Date 2015-05-04
Release Date 2016-09-07
Last Version Date 2023-11-08
Entry Detail
PDB ID:
4ZMY
Keywords:
Title:
Crystal structure of human P-cadherin (monomer 1)
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.50 Å
R-Value Free:
0.18
R-Value Work:
0.13
R-Value Observed:
0.13
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Cadherin-3
Gene (Uniprot):CDH3
Mutations:K14E
Chain IDs:A
Chain Length:214
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Adhesive Dimerization of Human P-Cadherin Catalyzed by a Chaperone-like Mechanism
Structure 24 1523 1536 (2016)
PMID: 27545624 DOI: 10.1016/j.str.2016.07.002

Abstact

Orderly assembly of classical cadherins governs cell adhesion and tissue maintenance. A key event is the strand-swap dimerization of the extracellular ectodomains of two cadherin molecules from apposing cells. Here we have determined crystal structures of P-cadherin in six different conformational states to elaborate a motion picture of its adhesive dimerization at the atomic level. The snapshots revealed that cell-adhesive dimerization is facilitated by several intermediate states collectively termed X-dimer in analogy to other classical cadherins. Based on previous studies and on the combined structural, kinetic, thermodynamic, biochemical, and cellular data reported herein, we propose that the adhesive dimerization of human P-cadherin is achieved by a stepwise mechanism analogous to that of assembly chaperones. This mechanism, applicable to type I classical cadherins, confers high specificity and fast association rates. We expect these findings to guide innovative therapeutic approaches targeting P-cadherin in cancer.

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Primary Citation of related structures