4ZYG image
Deposition Date 2015-05-21
Release Date 2015-08-12
Last Version Date 2024-11-20
Entry Detail
PDB ID:
4ZYG
Keywords:
Title:
Crystal structure of methylated Sulfolobus solfataricus O6-methylguanine methyltransferase
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.29
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Methylated-DNA--protein-cysteine methyltransferase
Gene (Uniprot):ogt
Chain IDs:A, B
Chain Length:151
Number of Molecules:2
Biological Source:Sulfolobus solfataricus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
SMC A CYS modified residue
Primary Citation
Structure-function relationships governing activity and stability of a DNA alkylation damage repair thermostable protein.
Nucleic Acids Res. 43 8801 8816 (2015)
PMID: 26227971 DOI: 10.1093/nar/gkv774

Abstact

Alkylated DNA-protein alkyltransferases repair alkylated DNA bases, which are among the most common DNA lesions, and are evolutionary conserved, from prokaryotes to higher eukaryotes. The human ortholog, hAGT, is involved in resistance to alkylating chemotherapy drugs. We report here on the alkylated DNA-protein alkyltransferase, SsOGT, from an archaeal species living at high temperature, a condition that enhances the harmful effect of DNA alkylation. The exceptionally high stability of SsOGT gave us the unique opportunity to perform structural and biochemical analysis of a protein of this class in its post-reaction form. This analysis, along with those performed on SsOGT in its ligand-free and DNA-bound forms, provides insights in the structure-function relationships of the protein before, during and after DNA repair, suggesting a molecular basis for DNA recognition, catalytic activity and protein post-reaction fate, and giving hints on the mechanism of alkylation-induced inactivation of this class of proteins.

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Primary Citation of related structures