4ZXL image
Deposition Date 2015-05-20
Release Date 2015-09-23
Last Version Date 2024-11-06
Entry Detail
PDB ID:
4ZXL
Title:
CpOGA D298N in complex with Drosophila HCF -derived Thr-O-GlcNAc peptide
Biological Source:
Method Details:
Experimental Method:
Resolution:
2.60 Å
R-Value Free:
0.22
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 61
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:O-GlcNAcase NagJ
Gene (Uniprot):nagJ
Chain IDs:B (auth: A)
Chain Length:579
Number of Molecules:1
Biological Source:Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Polymer Type:polypeptide(L)
Molecule:NAG-PRO-SER-THR-ALA-Thr-O-GlcNAc containing peptide from drosophila HCF
Chain IDs:A (auth: H)
Chain Length:4
Number of Molecules:1
Biological Source:Drosophila melanogaster
Primary Citation
A mutant O-GlcNAcase as a probe to reveal global dynamics of protein O-GlcNAcylation during Drosophila embryonic development.
Biochem.J. 470 255 262 (2015)
PMID: 26348912 DOI: 10.1042/BJ20150610

Abstact

O-GlcNAcylation is a reversible type of serine/threonine glycosylation on nucleocytoplasmic proteins in metazoa. Various genetic approaches in several animal models have revealed that O-GlcNAcylation is essential for embryogenesis. However, the dynamic changes in global O-GlcNAcylation and the underlying mechanistic biology linking them to embryonic development is not understood. One of the limiting factors towards characterizing changes in O-GlcNAcylation has been the limited specificity of currently available tools to detect this modification. In the present study, harnessing the unusual properties of an O-GlcNAcase (OGA) mutant that binds O-GlcNAc (O-N-acetylglucosamine) sites with nanomolar affinity, we uncover changes in protein O-GlcNAcylation as a function of Drosophila development.

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Primary Citation of related structures
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