4ZXB image
Entry Detail
PDB ID:
4ZXB
Title:
Structure of the human insulin receptor ectodomain, IRDeltabeta construct, in complex with four Fab molecules
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2015-05-20
Release Date:
2016-02-24
Method Details:
Experimental Method:
Resolution:
3.30 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Fab 83-7 heavy chain
Chain IDs:A
Chain Length:219
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Fab 83-7 light chain
Chain IDs:B
Chain Length:219
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Fab 83-14 heavy chain
Chain IDs:C
Chain Length:220
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Fab 83-14 light chain
Chain IDs:D
Chain Length:214
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Insulin receptor
Mutations:Y144H, V731A, T732G, V733N, A734N, residues 735-753 deleted
Chain IDs:E
Chain Length:894
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Higher-Resolution Structure of the Human Insulin Receptor Ectodomain: Multi-Modal Inclusion of the Insert Domain.
Structure 24 469 476 (2016)
PMID: 26853939 DOI: 10.1016/j.str.2015.12.014

Abstact

Insulin receptor (IR) signaling is critical to controlling nutrient uptake and metabolism. However, only a low-resolution (3.8 Å) structure currently exists for the IR ectodomain, with some segments ill-defined or unmodeled due to disorder. Here, we revise this structure using new diffraction data to 3.3 Å resolution that allow improved modeling of the N-linked glycans, the first and third fibronectin type III domains, and the insert domain. A novel haptic interactive molecular dynamics strategy was used to aid fitting to low-resolution electron density maps. The resulting model provides a foundation for investigation of structural transitions in IR upon ligand binding.

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