ISDA: 4ZS3

Deposition Date 2015-05-13

Release Date 2015-11-04

Last Version Date 2024-11-06

Entry Detail

PDB ID:

4ZS3

Keywords:

FLUORESCENT PROTEIN/INHIBITOR

Title:

Structural complex of 5-aminofluorescein bound to the FTO protein

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.45 Å

R-Value Free:

0.26

R-Value Work:

0.20

R-Value Observed:

0.20

Space Group:

H 3

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Alpha-ketoglutarate-dependent dioxygenase FTO
Gene (Uniprot):FTO
Chain IDs:A
Chain Length:478
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q9C0B1 Pfam ID:PF12933, PF12934 EC:1.14.11.53

Ligand Molecules

A4F

AKG

Primary Citation

Fluorescein Derivatives as Bifunctional Molecules for the Simultaneous Inhibiting and Labeling of FTO Protein

Wang, T, Hong, T, Huang, Y, Su, H, Wu, F, Chen, Y, Wei, L, Huang, W, Hua, X, Xia, Y, Xu, J, Gan, J, Yuan, B, Feng, Y, Zhang, X, Yang, C.G, Zhou, X.Show

J.Am.Chem.Soc. 137 13736 13739 (2015)

PMID: 26457839 DOI: 10.1021/jacs.5b06690

Abstact

The FTO protein is unequivocally reported to play a critical role in human obesity and in the regulation of cellular levels of m(6)A modification, which makes FTO a significant and worthy subject of study. Here, we identified that fluorescein derivatives can selectively inhibit FTO demethylation, and the mechanisms behind these activities were elucidated after we determined the X-ray crystal structures of FTO/fluorescein and FTO/5-aminofluorescein. Furthermore, these inhibitors can also be applied to the direct labeling and enrichment of FTO protein combined with photoaffinity labeling assay.

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