4ZOZ image
Deposition Date 2015-05-07
Release Date 2015-07-01
Last Version Date 2024-01-10
Entry Detail
PDB ID:
4ZOZ
Keywords:
Title:
Crystal structure of the Chaetomium thermophilum Sqt1 bound to the N-terminus of the ribosomal protein L10
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.21
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Sqt1
Gene (Uniprot):CTHT_0010920
Chain IDs:A, C (auth: B)
Chain Length:480
Number of Molecules:2
Biological Source:Chaetomium thermophilum
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L10-like protein
Gene (Uniprot):CTHT_0063830
Chain IDs:B (auth: Y), D (auth: C)
Chain Length:28
Number of Molecules:2
Biological Source:Chaetomium thermophilum
Primary Citation
Co-translational capturing of nascent ribosomal proteins by their dedicated chaperones.
Nat Commun 6 7494 7494 (2015)
PMID: 26112308 DOI: 10.1038/ncomms8494

Abstact

Exponentially growing yeast cells produce every minute >160,000 ribosomal proteins. Owing to their difficult physicochemical properties, the synthesis of assembly-competent ribosomal proteins represents a major challenge. Recent evidence highlights that dedicated chaperone proteins recognize the N-terminal regions of ribosomal proteins and promote their soluble expression and delivery to the assembly site. Here we explore the intuitive possibility that ribosomal proteins are captured by dedicated chaperones in a co-translational manner. Affinity purification of four chaperones (Rrb1, Syo1, Sqt1 and Yar1) selectively enriched the mRNAs encoding their specific ribosomal protein clients (Rpl3, Rpl5, Rpl10 and Rps3). X-ray crystallography reveals how the N-terminal, rRNA-binding residues of Rpl10 are shielded by Sqt1's WD-repeat β-propeller, providing mechanistic insight into the incorporation of Rpl10 into pre-60S subunits. Co-translational capturing of nascent ribosomal proteins by dedicated chaperones constitutes an elegant mechanism to prevent unspecific interactions and aggregation of ribosomal proteins on their road to incorporation.

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