4ZL4 image
Deposition Date 2015-05-01
Release Date 2015-07-15
Last Version Date 2024-10-23
Entry Detail
PDB ID:
4ZL4
Title:
Plasmepsin V from Plasmodium vivax bound to a transition state mimetic (WEHI-842)
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.37 Å
R-Value Free:
0.22
R-Value Work:
0.17
R-Value Observed:
0.18
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Aspartic protease PM5
Chain IDs:A, B
Chain Length:444
Number of Molecules:2
Biological Source:Plasmodium vivax
Peptide-like Molecules
PRD_002168
Primary Citation
Structural basis for plasmepsin V inhibition that blocks export of malaria proteins to human erythrocytes.
Nat.Struct.Mol.Biol. 22 590 596 (2015)
PMID: 26214367 DOI: 10.1038/nsmb.3061

Abstact

Plasmepsin V, an essential aspartyl protease of malaria parasites, has a key role in the export of effector proteins to parasite-infected erythrocytes. Consequently, it is an important drug target for the two most virulent malaria parasites of humans, Plasmodium falciparum and Plasmodium vivax. We developed a potent inhibitor of plasmepsin V, called WEHI-842, which directly mimics the Plasmodium export element (PEXEL). WEHI-842 inhibits recombinant plasmepsin V with a half-maximal inhibitory concentration of 0.2 nM, efficiently blocks protein export and inhibits parasite growth. We obtained the structure of P. vivax plasmepsin V in complex with WEHI-842 to 2.4-Å resolution, which provides an explanation for the strict requirements for substrate and inhibitor binding. The structure characterizes both a plant-like fold and a malaria-specific helix-turn-helix motif that are likely to be important in cleavage of effector substrates for export.

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Primary Citation of related structures