4ZGS image
Deposition Date 2015-04-23
Release Date 2015-12-02
Last Version Date 2024-01-10
Entry Detail
PDB ID:
4ZGS
Keywords:
Title:
Identification of the pyruvate reductase of Chlamydomonas reinhardtii
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.46 Å
R-Value Free:
0.25
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Putative D-lactate dehydrogenase
Gene (Uniprot):CHLRE_07g324550v5
Chain IDs:A, B, C, D, E, F, G, H
Chain Length:386
Number of Molecules:8
Biological Source:Chlamydomonas reinhardtii
Ligand Molecules
Primary Citation
Identification of the Elusive Pyruvate Reductase of Chlamydomonas reinhardtii Chloroplasts.
Plant Cell.Physiol. 57 82 94 (2016)
PMID: 26574578 DOI: 10.1093/pcp/pcv167

Abstact

Under anoxic conditions the green alga Chlamydomonas reinhardtii activates various fermentation pathways leading to the creation of formate, acetate, ethanol and small amounts of other metabolites including d-lactate and hydrogen. Progress has been made in identifying the enzymes involved in these pathways and their subcellular locations; however, the identity of the enzyme involved in reducing pyruvate to d-lactate has remained unclear. Based on sequence comparisons, enzyme activity measurements, X-ray crystallography, biochemical fractionation and analysis of knock-down mutants, we conclude that pyruvate reduction in the chloroplast is catalyzed by a tetrameric NAD(+)-dependent d-lactate dehydrogenase encoded by Cre07.g324550. Its expression during aerobic growth supports a possible function as a 'lactate valve' for the export of lactate to the mitochondrion for oxidation by cytochrome-dependent d-lactate dehydrogenases and by glycolate dehydrogenase. We also present a revised spatial model of fermentation based on our immunochemical detection of the likely pyruvate decarboxylase, PDC3, in the cytoplasm.

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Primary Citation of related structures