4ZBL image
Deposition Date 2015-04-14
Release Date 2015-12-23
Last Version Date 2024-11-06
Entry Detail
PDB ID:
4ZBL
Title:
Phototoxic fluorescent protein mKillerOrange
Biological Source:
Source Organism:
Hydrozoa (Taxon ID: 6074)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.57 Å
R-Value Free:
0.17
R-Value Work:
0.14
R-Value Observed:
0.14
Space Group:
P 31
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:KillerOrange
Mutations:Y66W
Chain IDs:A
Chain Length:242
Number of Molecules:1
Biological Source:Hydrozoa
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
4M9 A GLN chromophore
Primary Citation
Crystal Structure of Phototoxic Orange Fluorescent Proteins with a Tryptophan-Based Chromophore.
Plos One 10 e0145740 e0145740 (2015)
PMID: 26699366 DOI: 10.1371/journal.pone.0145740

Abstact

Phototoxic fluorescent proteins represent a sparse group of genetically encoded photosensitizers that could be used for precise light-induced inactivation of target proteins, DNA damage, and cell killing. Only two such GFP-based fluorescent proteins (FPs), KillerRed and its monomeric variant SuperNova, were described up to date. Here, we present a crystallographic study of their two orange successors, dimeric KillerOrange and monomeric mKillerOrange, at 1.81 and 1.57 Å resolution, respectively. They are the first orange-emitting protein photosensitizers with a tryptophan-based chromophore (Gln65-Trp66-Gly67). Same as their red progenitors, both orange photosensitizers have a water-filled channel connecting the chromophore to the β-barrel exterior and enabling transport of ROS. In both proteins, Trp66 of the chromophore adopts an unusual trans-cis conformation stabilized by H-bond with the nearby Gln159. This trans-cis conformation along with the water channel was shown to be a key structural feature providing bright orange emission and phototoxicity of both examined orange photosensitizers.

Legend

Protein

Chemical

Disease

Primary Citation of related structures