4ZB1 image
Deposition Date 2015-04-14
Release Date 2015-08-12
Last Version Date 2024-10-23
Entry Detail
PDB ID:
4ZB1
Title:
Crystal Structure of Blue Chromoprotein sgBP from Stichodactyla Gigantea
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.25 Å
R-Value Free:
0.21
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Blue chromoprotein, sgBP
Chain IDs:A, B
Chain Length:251
Number of Molecules:2
Biological Source:Stichodactyla gigantea
Ligand Molecules
Primary Citation
Chromophore Deprotonation State Alters the Optical Properties of Blue Chromoprotein
Plos One 10 e0134108 e0134108 (2015)
PMID: 26218063 DOI: 10.1371/journal.pone.0134108

Abstact

Chromoproteins (CPs) have unique colors and can be used in biological applications. In this work, a novel blue CP with a maximum absorption peak (λmax) at 608 nm was identified from the carpet anemone Stichodactyla gigantea (sgBP). In vivo expression of sgBP in zebrafish would change the appearance of the fishes to have a blue color, indicating the potential biomarker function. To enhance the color properties, the crystal structure of sgBP at 2.25 Å resolution was determined to allow structure-based protein engineering. Among the mutations conducted in the Gln-Tyr-Gly chromophore and chromophore environment, a S157C mutation shifted the λmax to 604 nm with an extinction coefficient (ε) of 58,029 M-1·cm-1 and darkened the blue color expression. The S157C mutation in the sgBP chromophore environment could affect the color expression by altering the deprotonation state of the phenolic group in the chromophore. Our results provide a structural basis for the blue color enhancement of the biomarker development.

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Primary Citation of related structures