4Z94 image
Deposition Date 2015-04-09
Release Date 2015-10-21
Last Version Date 2023-09-27
Entry Detail
PDB ID:
4Z94
Title:
Actin Complex With a Chimera of Tropomodulin-1 and Leiomodin-1 Actin-Binding Site 2
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.24
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Actin, alpha skeletal muscle
Gene (Uniprot):ACTA1
Chain IDs:A
Chain Length:377
Number of Molecules:1
Biological Source:Oryctolagus cuniculus
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Gelsolin, Tropomodulin-1, Leiomodin-1 chimera
Gene (Uniprot):GSN, TMOD1, LMOD1
Chain IDs:B (auth: G)
Chain Length:326
Number of Molecules:1
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
HIC A HIS modified residue
Primary Citation
How Leiomodin and Tropomodulin use a common fold for different actin assembly functions.
Nat Commun 6 8314 8314 (2015)
PMID: 26370058 DOI: 10.1038/ncomms9314

Abstact

How proteins sharing a common fold have evolved different functions is a fundamental question in biology. Tropomodulins (Tmods) are prototypical actin filament pointed-end-capping proteins, whereas their homologues, Leiomodins (Lmods), are powerful filament nucleators. We show that Tmods and Lmods do not compete biochemically, and display similar but distinct localization in sarcomeres. Changes along the polypeptide chains of Tmods and Lmods exquisitely adapt their functions for capping versus nucleation. Tmods have alternating tropomyosin (TM)- and actin-binding sites (TMBS1, ABS1, TMBS2 and ABS2). Lmods additionally contain a C-terminal extension featuring an actin-binding WH2 domain. Unexpectedly, the different activities of Tmods and Lmods do not arise from the Lmod-specific extension. Instead, nucleation by Lmods depends on two major adaptations-the loss of pointed-end-capping elements present in Tmods and the specialization of the highly conserved ABS2 for recruitment of two or more actin subunits. The WH2 domain plays only an auxiliary role in nucleation.

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Primary Citation of related structures