4Z89 image
Deposition Date 2015-04-08
Release Date 2015-08-05
Last Version Date 2024-11-13
Entry Detail
PDB ID:
4Z89
Title:
SH3-II of Drosophila Rim-binding protein bound to a Cacophony derived peptide
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.64 Å
R-Value Free:
0.31
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:RIM-binding protein, isoform F
Gene (Uniprot):Rbp
Chain IDs:A, B, C, D, E, F, G, H, I, J
Chain Length:73
Number of Molecules:10
Biological Source:Drosophila melanogaster
Polymer Type:polypeptide(L)
Molecule:Voltage-dependent calcium channel type A subunit alpha-1
Gene (Uniprot):cac
Chain IDs:K (auth: a), L (auth: b), M (auth: c), N (auth: d), O (auth: e), P (auth: f), Q (auth: g), R (auth: h), S (auth: i), T (auth: j)
Chain Length:73
Number of Molecules:10
Biological Source:Drosophila melanogaster
Ligand Molecules
Primary Citation
A high affinity RIM-binding protein/Aplip1 interaction prevents the formation of ectopic axonal active zones.
Elife 4 ? ? (2015)
PMID: 26274777 DOI: 10.7554/eLife.06935

Abstact

Synaptic vesicles (SVs) fuse at active zones (AZs) covered by a protein scaffold, at Drosophila synapses comprised of ELKS family member Bruchpilot (BRP) and RIM-binding protein (RBP). We here demonstrate axonal co-transport of BRP and RBP using intravital live imaging, with both proteins co-accumulating in axonal aggregates of several transport mutants. RBP, via its C-terminal Src-homology 3 (SH3) domains, binds Aplip1/JIP1, a transport adaptor involved in kinesin-dependent SV transport. We show in atomic detail that RBP C-terminal SH3 domains bind a proline-rich (PxxP) motif of Aplip1/JIP1 with submicromolar affinity. Pointmutating this PxxP motif provoked formation of ectopic AZ-like structures at axonal membranes. Direct interactions between AZ proteins and transport adaptors seem to provide complex avidity and shield synaptic interaction surfaces of pre-assembled scaffold protein transport complexes, thus, favouring physiological synaptic AZ assembly over premature assembly at axonal membranes.

Legend

Protein

Chemical

Disease

Primary Citation of related structures