4YZE image
Deposition Date 2015-03-24
Release Date 2016-02-03
Last Version Date 2023-09-27
Entry Detail
PDB ID:
4YZE
Keywords:
Title:
Crystal structure of E.coli NemR reduced form
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.25
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:HTH-type transcriptional repressor NemR
Gene (Uniprot):nemR
Mutations:C21S, C98S, C116S, C149S, C153S
Chain IDs:A, B, C, D
Chain Length:201
Number of Molecules:4
Biological Source:Escherichia coli
Primary Citation
Does the Transcription Factor NemR Use a Regulatory Sulfenamide Bond to Sense Bleach?
Antioxid.Redox Signal. 23 747 754 (2015)
PMID: 25867078 DOI: 10.1089/ars.2015.6346

Abstact

Reactive chlorine species (RCS), such as hypochlorous acid (i.e., bleach), are antimicrobial oxidants produced by the innate immune system. Like many redox-regulated transcription factors, the Escherichia coli repressor NemR responds to RCS by using the reversible oxidation of highly conserved cysteines to alter its DNA-binding affinity. However, earlier work showed that RCS response in NemR does not depend on any commonly known oxidative cysteine modifications. We have now determined the crystal structure of NemR, showing that the regulatory cysteine, Cys106, is in close proximity to a highly conserved lysine (Lys175). We used crystallographic, biochemical, and mass spectrometric analyses to analyze the role of this lysine residue in RCS sensing. Based on our results, we hypothesize that RCS treatment of NemR results in the formation of a reversible Cys106-Lys175 sulfenamide bond. This is, to our knowledge, the first description of a protein whose function is regulated by a cysteine-lysine sulfenamide thiol switch, constituting a novel addition to the biological repertoire of functional redox switches.

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