4YWK image
Deposition Date 2015-03-20
Release Date 2015-09-23
Last Version Date 2023-09-27
Entry Detail
PDB ID:
4YWK
Keywords:
Title:
Pyrococcus furiosus MCM N-terminal domain with Zinc-binding subdomain B deleted
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.55 Å
R-Value Free:
0.24
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Cell division control protein 21
Gene (Uniprot):PF0482
Mutations:deletion of internal subdomain B
Chain IDs:A, B
Chain Length:206
Number of Molecules:2
Biological Source:Pyrococcus furiosus
Primary Citation
MCM ring hexamerization is a prerequisite for DNA-binding.
Nucleic Acids Res. 43 9553 9563 (2015)
PMID: 26365238 DOI: 10.1093/nar/gkv914

Abstact

The hexameric Minichromosome Maintenance (MCM) protein complex forms a ring that unwinds DNA at the replication fork in eukaryotes and archaea. Our recent crystal structure of an archaeal MCM N-terminal domain bound to single-stranded DNA (ssDNA) revealed ssDNA associating across tight subunit interfaces but not at the loose interfaces, indicating that DNA-binding is governed not only by the DNA-binding residues of the subunits (MCM ssDNA-binding motif, MSSB) but also by the relative orientation of the subunits. We now extend these findings by showing that DNA-binding by the MCM N-terminal domain of the archaeal organism Pyrococcus furiosus occurs specifically in the hexameric oligomeric form. We show that mutants defective for hexamerization are defective in binding ssDNA despite retaining all the residues observed to interact with ssDNA in the crystal structure. One mutation that exhibits severely defective hexamerization and ssDNA-binding is at a conserved phenylalanine that aligns with the mouse Mcm4(Chaos3) mutation associated with chromosomal instability, cancer, and decreased intersubunit association.

Legend

Protein

Chemical

Disease

Primary Citation of related structures