ISDA

Deposition Date 2015-03-13

Release Date 2016-03-16

Last Version Date 2023-09-27

Entry Detail

PDB ID:

4YPW

Keywords:

transferase/transferase inhibitor

Title:

Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds

Biological Source:

Source Organism:

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (Taxon ID: 71421)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.31 Å

R-Value Free:

0.24

R-Value Work:

0.19

R-Value Observed:

0.19

Space Group:

H 3 2

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:tRNA (guanine-N(1)-)-methyltransferase
Gene (Uniprot):trmD
Chain IDs:A
Chain Length:254
Number of Molecules:1
Biological Source:Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

UniProt ID:P43912 Pfam ID:PF01746 EC:2.1.1.228

Ligand Molecules

4FD

Primary Citation

Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds

Elkins, P.A, Bonnette, W.G, Stuckey, J.A.Show

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Primary Citation of related structures