4YNN image
Deposition Date 2015-03-10
Release Date 2015-06-24
Last Version Date 2024-01-10
Entry Detail
PDB ID:
4YNN
Keywords:
Title:
Structure of Legionella pneumophila DegQ (S190A variant)
Biological Source:
Source Organism(s):
Expression System(s):
Method Details:
Experimental Method:
Resolution:
3.20 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 63
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Protease DO
Gene (Uniprot):htrA
Mutagens:S190A
Chain IDs:A, B, C, D, E, F, G, H
Chain Length:448
Number of Molecules:8
Biological Source:Legionella pneumophila subsp. pneumophila
Polymer Type:polypeptide(L)
Molecule:Octapeptide
Chain IDs:I
Chain Length:8
Number of Molecules:1
Biological Source:Escherichia coli
Polymer Type:polypeptide(L)
Molecule:Hexa-peptide
Chain IDs:J, L
Chain Length:6
Number of Molecules:2
Biological Source:Escherichia coli
Polymer Type:polypeptide(L)
Molecule:Hepta-peptide
Chain IDs:K, M, N, O, P
Chain Length:7
Number of Molecules:5
Biological Source:Escherichia coli
Polymer Type:polypeptide(L)
Molecule:UNK-UNK-UNK
Chain IDs:Q, R, S, T, U, V
Chain Length:3
Number of Molecules:6
Biological Source:Escherichia coli
Ligand Molecules
Primary Citation
Structures of DegQ from Legionella pneumophila Define Distinct ON and OFF States.
J.Mol.Biol. 427 2840 2851 (2015)
PMID: 26205420 DOI: 10.1016/j.jmb.2015.06.023

Abstact

HtrA (high-temperature requirement A) family proteins play important roles in protein-quality control processes in the bacterial periplasm. A common feature of all members of this family is their modular organization comprising a chymotrypsin-like protease domain and at least one PDZ (postsynaptic density of 95 kDa, disks large homolog 1 and zonula occludens 1) domain. All characterized HtrA proteins assemble into complex oligomers consisting of typically 3-24 monomers, which allow a tight regulation of proteolytic activity. Here, we provide evidence that the assembly of proteolytically active, higher-order complexes of DegQ from Legionella pneumophila is triggered by the binding of substrate-derived peptides. Crystal structures of inactive 3-mers and active 12-mers of DegQ reveal molecular details of elements of a conserved allosteric activation cascade that defines distinct protease ON and OFF states. Results from DegQ(Lp) variants harboring structure-based amino acid substitutions indicate that peptide binding to the PDZ1 domain is critical for proteolytic activity but not for the formation of higher-order oligomers. Combining structural, mutagenesis and biochemical data, we show that, in contrast to the proteolytic activity, the chaperone function of DegQ is not affected by the state of the activation cascade.

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Primary Citation of related structures
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