ISDA

Deposition Date 2015-03-03

Release Date 2015-09-30

Last Version Date 2024-11-20

Entry Detail

PDB ID:

4YJR

Keywords:

TRANSFERASE

Title:

SYK kinase domain in complex with inhibitor GTC000225

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Spodoptera frugiperda

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.32 Å

R-Value Free:

0.18

R-Value Work:

0.15

R-Value Observed:

0.15

Space Group:

P 1 21 1

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Tyrosine-protein kinase SYK
Gene (Uniprot):SYK
Chain IDs:A
Chain Length:281
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P43405 Pfam ID:PF07714 EC:2.7.10.2

Modified Residue

Compound ID	Chain ID	Parent Comp ID	Details	2D Image
PTR	A	TYR	modified residue

Ligand Molecules

4DJ

Primary Citation

Discovery of GSK143, a highly potent, selective and orally efficacious spleen tyrosine kinase inhibitor.

Liddle, J, Atkinson, F.L, Barker, M.D, Carter, P.S, Curtis, N.R, Davis, R.P, Douault, C, Dickson, M.C, Elwes, D, Garton, N.S, Gray, M, Hayhow, T.G, Hobbs, C.I, Jones, E, Leach, S, Leavens, K, Lewis, H.D, McCleary, S, Neu, M, Patel, V.K, Preston, A.G, Ramirez-Molina, C, Shipley, T.J, Skone, P.A, Smithers, N, Somers, D.O, Walker, A.L, Watson, R.J, Weingarten, G.G.Show

Bioorg. Med. Chem. Lett. 21 6188 6194 (2011)

PMID: 21903390 DOI: 10.1016/j.bmcl.2011.07.082

Abstact

The lead optimisation of the diaminopyrimidine carboxamide series of spleen tyrosine kinase inhibitors is described. The medicinal chemistry strategy was focused on optimising the human whole blood activity whilst achieving a sufficient margin over liability kinases and hERG activity. GSK143 is a potent and highly selective SYK inhibitor showing good efficacy in the rat Arthus model.

Legend

Protein

Chemical

Disease

Primary Citation of related structures