ISDA: 4YIH

Deposition Date 2015-03-02

Release Date 2015-09-09

Last Version Date 2024-01-10

Entry Detail

PDB ID:

4YIH

Keywords:

HYDROLASE/HYDROLASE INHIBITOR

Title:

Crystal structure of human cytosolic 5'(3')-deoxyribonucleotidase in complex with the inhibitor PB-PVU

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.82 Å

R-Value Free:

0.22

R-Value Work:

0.18

R-Value Observed:

0.18

Space Group:

P 1

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:5'(3')-deoxyribonucleotidase, cytosolic type
Gene (Uniprot):NT5C
Chain IDs:A, B
Chain Length:195
Number of Molecules:2
Biological Source:Homo sapiens

UniProt ID:Q8TCD5 Pfam ID:PF06941

Ligand Molecules

2O2

GOL

PO4

Primary Citation

Structure-based design of a bisphosphonate 5'(3')-deoxyribonucleotidase inhibitor

Pachl, P, Simak, O, Rezacova, P, Fabry, M, Budesinsky, M, Rosenberg, I, Brynda, J.Show

Medchemcomm 6 1635 1638 (2015)

DOI: 10.1039/C5MD00235D

Primary Citation of related structures