4YFZ image
Entry Detail
PDB ID:
4YFZ
Keywords:
Title:
Structural basis of glycan recognition in neonate-specific rotaviruses
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2015-02-25
Release Date:
2015-09-30
Method Details:
Experimental Method:
Resolution:
1.50 Å
R-Value Free:
0.20
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Outer capsid protein VP4
Chain IDs:A
Chain Length:164
Number of Molecules:1
Biological Source:Human rotavirus A
Primary Citation
Structural basis of glycan specificity in neonate-specific bovine-human reassortant rotavirus.
Nat Commun 6 8346 8346 (2015)
PMID: 26420502 DOI: 10.1038/ncomms9346

Abstact

Strain-dependent variation of glycan recognition during initial cell attachment of viruses is a critical determinant of host specificity, tissue-tropism and zoonosis. Rotaviruses (RVs), which cause life-threatening gastroenteritis in infants and children, display significant genotype-dependent variations in glycan recognition resulting from sequence alterations in the VP8* domain of the spike protein VP4. The structural basis of this genotype-dependent glycan specificity, particularly in human RVs, remains poorly understood. Here, from crystallographic studies, we show how genotypic variations configure a novel binding site in the VP8* of a neonate-specific bovine-human reassortant to uniquely recognize either type I or type II precursor glycans, and to restrict type II glycan binding in the bovine counterpart. Such a distinct glycan-binding site that allows differential recognition of the precursor glycans, which are developmentally regulated in the neonate gut and abundant in bovine and human milk provides a basis for age-restricted tropism and zoonotic transmission of G10P[11] rotaviruses.

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