4YFW image
Entry Detail
PDB ID:
4YFW
Keywords:
Title:
Structural basis of glycan recognition in neonate-specific rotaviruses
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2015-02-25
Release Date:
2015-09-30
Method Details:
Experimental Method:
Resolution:
1.66 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.22
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Outer capsid protein VP4
Chain IDs:A, B
Chain Length:164
Number of Molecules:2
Biological Source:Rotavirus A
Primary Citation
Structural basis of glycan specificity in neonate-specific bovine-human reassortant rotavirus.
Nat Commun 6 8346 8346 (2015)
PMID: 26420502 DOI: 10.1038/ncomms9346

Abstact

Strain-dependent variation of glycan recognition during initial cell attachment of viruses is a critical determinant of host specificity, tissue-tropism and zoonosis. Rotaviruses (RVs), which cause life-threatening gastroenteritis in infants and children, display significant genotype-dependent variations in glycan recognition resulting from sequence alterations in the VP8* domain of the spike protein VP4. The structural basis of this genotype-dependent glycan specificity, particularly in human RVs, remains poorly understood. Here, from crystallographic studies, we show how genotypic variations configure a novel binding site in the VP8* of a neonate-specific bovine-human reassortant to uniquely recognize either type I or type II precursor glycans, and to restrict type II glycan binding in the bovine counterpart. Such a distinct glycan-binding site that allows differential recognition of the precursor glycans, which are developmentally regulated in the neonate gut and abundant in bovine and human milk provides a basis for age-restricted tropism and zoonotic transmission of G10P[11] rotaviruses.

Legend

Protein

Chemical

Disease

Primary Citation of related structures