4YBQ image
Deposition Date 2015-02-19
Release Date 2015-10-07
Last Version Date 2024-10-23
Entry Detail
PDB ID:
4YBQ
Title:
Rat GLUT5 with Fv in the outward-open form
Biological Source:
Source Organism:
Rattus norvegicus (Taxon ID: 10116)
Mus musculus (Taxon ID: 10090)
Method Details:
Experimental Method:
Resolution:
3.27 Å
R-Value Free:
0.28
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Solute carrier family 2, facilitated glucose transporter member 5
Gene (Uniprot):Slc2a5
Mutations:N50Y
Chain IDs:A, B
Chain Length:508
Number of Molecules:2
Biological Source:Rattus norvegicus
Polymer Type:polypeptide(L)
Molecule:antibody Fv fragment light chain
Chain IDs:C, E
Chain Length:122
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:antibody Fv fragment heavy chain
Chain IDs:D, F
Chain Length:136
Number of Molecules:2
Biological Source:Mus musculus
Ligand Molecules
Primary Citation

Abstact

The altered activity of the fructose transporter GLUT5, an isoform of the facilitated-diffusion glucose transporter family, has been linked to disorders such as type 2 diabetes and obesity. GLUT5 is also overexpressed in certain tumour cells, and inhibitors are potential drugs for these conditions. Here we describe the crystal structures of GLUT5 from Rattus norvegicus and Bos taurus in open outward- and open inward-facing conformations, respectively. GLUT5 has a major facilitator superfamily fold like other homologous monosaccharide transporters. On the basis of a comparison of the inward-facing structures of GLUT5 and human GLUT1, a ubiquitous glucose transporter, we show that a single point mutation is enough to switch the substrate-binding preference of GLUT5 from fructose to glucose. A comparison of the substrate-free structures of GLUT5 with occluded substrate-bound structures of Escherichia coli XylE suggests that, in addition to global rocker-switch-like re-orientation of the bundles, local asymmetric rearrangements of carboxy-terminal transmembrane bundle helices TM7 and TM10 underlie a 'gated-pore' transport mechanism in such monosaccharide transporters.

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Primary Citation of related structures