4YBK image
Deposition Date 2015-02-18
Release Date 2016-03-02
Last Version Date 2023-09-27
Entry Detail
PDB ID:
4YBK
Keywords:
Title:
C-Helix-Out Dasatinib Analog Crystallized with c-Src Kinase
Biological Source:
Source Organism:
Gallus gallus (Taxon ID: 9031)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.25
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Proto-oncogene tyrosine-protein kinase Src
Gene (Uniprot):SRC
Chain IDs:A
Chain Length:286
Number of Molecules:1
Biological Source:Gallus gallus
Ligand Molecules
Primary Citation
Conformation-Selective Analogues of Dasatinib Reveal Insight into Kinase Inhibitor Binding and Selectivity.
Acs Chem.Biol. 11 1296 1304 (2016)
PMID: 26895387 DOI: 10.1021/acschembio.5b01018

Abstact

In the kinase field, there are many widely held tenets about conformation-selective inhibitors that have yet to be validated using controlled experiments. We have designed, synthesized, and characterized a series of kinase inhibitor analogues of dasatinib, an FDA-approved kinase inhibitor that binds the active conformation. This inhibitor series includes two Type II inhibitors that bind the DFG-out inactive conformation and two inhibitors that bind the αC-helix-out inactive conformation. Using this series of compounds, we analyze the impact that conformation-selective inhibitors have on target binding and kinome-wide selectivity.

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Protein

Chemical

Disease

Primary Citation of related structures