4Y6K image
Deposition Date 2015-02-13
Release Date 2015-03-18
Last Version Date 2023-11-08
Entry Detail
PDB ID:
4Y6K
Title:
Complex structure of presenilin homologue PSH bound to an inhibitor
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.86 Å
R-Value Free:
0.36
R-Value Work:
0.31
R-Value Observed:
0.32
Space Group:
C 2 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Uncharacterized protein PSH
Gene (Uniprot):Memar_1924
Mutagens:D40N, E42S, A147E, V148P, A229V
Chain IDs:A, B, C, D
Chain Length:301
Number of Molecules:4
Biological Source:Methanoculleus marisnigri JR1
Ligand Molecules
Peptide-like Molecules
PRD_002147
Primary Citation
Cleavage of amyloid precursor protein by an archaeal presenilin homologue PSH
Proc.Natl.Acad.Sci.USA 112 3344 3349 (2015)
PMID: 25733893 DOI: 10.1073/pnas.1502150112

Abstact

Aberrant cleavage of amyloid precursor protein (APP) by γ-secretase contributes to the development of Alzheimer's disease. More than 200 disease-derived mutations have been identified in presenilin (the catalytic subunit of γ-secretase), making modulation of γ-secretase activity a potentially attractive therapeutic opportunity. Unfortunately, the technical challenges in dealing with intact γ-secretase have hindered discovery of modulators and demand a convenient substitute approach. Here we report that, similar to γ-secretase, the archaeal presenilin homolog PSH faithfully processes the substrate APP C99 into Aβ42, Aβ40, and Aβ38. The molar ratio of the cleavage products Aβ42 over Aβ40 by PSH is nearly identical to that by γ-secretase. The proteolytic activity of PSH is specifically suppressed by presenilin-specific inhibitors. Known modulators of γ-secretase also modulate PSH similarly in terms of the Aβ42/Aβ40 ratio. Structural analysis reveals association of a known γ-secretase inhibitor with PSH between its two catalytic aspartate residues. These findings identify PSH as a surrogate protease for the screening of agents that may regulate the protease activity and the cleavage preference of γ-secretase.

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Chemical

Disease

Primary Citation of related structures
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