4Y5F image
Entry Detail
PDB ID:
4Y5F
Keywords:
Title:
PAS-GAF fragment from Deinococcus radiodurans BphP assembled with BV - Y307S, high dose
Biological Source:
PDB Version:
Deposition Date:
2015-02-11
Release Date:
2015-05-20
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.21
R-Value Work:
0.14
R-Value Observed:
0.14
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Bacteriophytochrome
Mutations:Y307S
Chain IDs:A
Chain Length:319
Number of Molecules:1
Biological Source:Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Ligand Molecules
Primary Citation
X-ray radiation induces deprotonation of the bilin chromophore in crystalline D. radiodurans phytochrome.
J.Am.Chem.Soc. 137 2792 2795 (2015)
PMID: 25650486 DOI: 10.1021/ja510923m

Abstact

We report that in the red light-absorbing (Pr) state, the bilin chromophore of the Deinococcus radiodurans proteobacterial phytochrome (DrBphP) is hypersensitive to X-ray photons used in typical synchrotron X-ray protein crystallography experiments. This causes the otherwise fully protonated chromophore to deprotonate without additional major structural changes. These results have major implications for our understanding of the structural and chemical characteristics of the resting and intermediate states of phytochromes and other photoreceptor proteins.

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Primary Citation of related structures