ISDA: 4Y1D

Deposition Date 2015-02-07

Release Date 2015-05-13

Last Version Date 2023-11-15

Entry Detail

PDB ID:

4Y1D

Keywords:

TRANSFERASE/TRANSFERASE BINDING PROTEIN

Title:

Cyclic hexapeptide cyc[NdPopPKID] in complex with HIV-1 integrase core domain

Biological Source:

Source Organism:

Human immunodeficiency virus 1 (Taxon ID: 11676)
synthetic construct (Taxon ID: 32630)

Host Organism:

Escherichia coli K-12

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.93 Å

R-Value Free:

0.23

R-Value Work:

0.18

R-Value Observed:

0.18

Space Group:

P 21 21 21

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Integrase
Mutagens:C56S, W131D, F139D, F185H
Chain IDs:A, B
Chain Length:167
Number of Molecules:2
Biological Source:Human immunodeficiency virus 1

UniProt ID:P12497 Pfam ID:PF00665

Polymer Type:polypeptide(L)
Molecule:Cyclic hexapeptide cyc[NdPopPKID]
Chain IDs:C (auth: D)
Chain Length:6
Number of Molecules:1
Biological Source:synthetic construct

Ligand Molecules

SO4

Primary Citation

HEXAPEPTIDE MIMETICS OF LEDGF IN COMPLEX WITH HIV-1 INTEGRASE

Northfield, S.E, Wielens, J, Headey, S.J, Mulcair, M, Scanlon, M.J, Parker, M.W, Thompson, P.E, Chalmers, D.K.Show

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Primary Citation of related structures