4XXG image
Deposition Date 2015-01-30
Release Date 2015-12-30
Last Version Date 2023-09-27
Entry Detail
PDB ID:
4XXG
Keywords:
Title:
Structure of protonated Cholesterol Oxidase from Streptomyces SA-COO
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
0.85 Å
R-Value Free:
0.12
R-Value Work:
0.11
R-Value Observed:
0.11
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cholesterol oxidase
Gene (Uniprot):choA
Chain IDs:A
Chain Length:510
Number of Molecules:1
Biological Source:Streptomyces sp. SA-COO
Ligand Molecules
Primary Citation
Production and characterization of recombinant perdeuterated cholesterol oxidase.
Anal.Biochem. 485 102 108 (2015)
PMID: 26073659 DOI: 10.1016/j.ab.2015.06.008

Abstact

Cholesterol oxidase (CO) is a FAD (flavin adenine dinucleotide) containing enzyme that catalyzes the oxidization and isomerization of cholesterol. Studies directed toward elucidating the catalytic mechanism of CO will provide an important general understanding of Flavin-assisted redox catalysis. Hydrogen atoms play an important role in enzyme catalysis; however, they are not readily visualized in protein X-ray diffraction structures. Neutron crystallography is an ideal method for directly visualizing hydrogen positions at moderate resolutions because hydrogen and deuterium have comparable neutron scattering lengths to other heavy atoms present in proteins. The negative coherent and large incoherent scattering lengths of hydrogen atoms in neutron diffraction experiments can be circumvented by replacing hydrogen atoms with its isotope, deuterium. The perdeuterated form of CO was successfully expressed from minimal medium, purified, and crystallized. X-ray crystallographic structures of the enzyme in the perdeuterated and hydrogenated states confirm that there are no apparent structural differences between the two enzyme forms. Kinetic assays demonstrate that perdeuterated and hydrogenated enzymes are functionally identical. Together, structural and functional studies indicate that the perdeuterated protein is suitable for structural studies by neutron crystallography directed at understanding the role of hydrogen atoms in enzyme catalysis.

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Primary Citation of related structures
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