4XOJ image
Deposition Date 2015-01-16
Release Date 2015-08-12
Last Version Date 2024-10-09
Entry Detail
PDB ID:
4XOJ
Keywords:
Title:
Structure of bovine trypsin in complex with analogues of sunflower inhibitor 1 (SFTI-1)
Biological Source:
Source Organism:
Helianthus annuus (Taxon ID: 4232)
Bos taurus (Taxon ID: 9913)
Method Details:
Experimental Method:
Resolution:
0.91 Å
R-Value Free:
0.11
R-Value Work:
0.10
R-Value Observed:
0.10
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cationic trypsin
Gene (Uniprot):PRSS1
Chain IDs:A
Chain Length:246
Number of Molecules:1
Biological Source:Bos taurus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Trypsin inhibitor 1
Gene (Uniprot):sfti1
Chain IDs:B
Chain Length:13
Number of Molecules:1
Biological Source:Helianthus annuus
Primary Citation
Investigation of Serine-Proteinase-Catalyzed Peptide Splicing in Analogues of Sunflower Trypsin Inhibitor 1 (SFTI-1).
Chembiochem 16 2036 2045 (2015)
PMID: 26212347 DOI: 10.1002/cbic.201500296

Abstact

Serine-proteinase-catalyzed peptide splicing was demonstrated in analogues of the trypsin inhibitor SFTI-1: both single peptides and two-peptide chains (C- and N-terminal peptide chains linked by a disulfide bridge). In the second series, peptide splicing with catalytic amount of proteinase was observed only when formation of acyl-enzyme intermediate was preceded by hydrolysis of the substrate Lys-Ser peptide bond. Here we demonstrate that with an equimolar amount of the proteinase, splicing occurs in all the two-peptide-chain analogues. This conclusion was supported by high resolution crystal structures of selected analogues in complex with trypsin. We showed that the process followed a direct transpeptidation mechanism. Thus, the acyl-enzyme intermediate was formed and was immediately used for a new peptide bond formation; products associated with the hydrolysis of the acyl-enzyme were not observed. The peptide splicing was sequence- not structure-specific.

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